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MouseLand / suite2p

cell detection in calcium imaging recordings
http://www.suite2p.org
GNU General Public License v3.0
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BUG: model_path() takes from 1 to 2 positional arguments but 3 were given #1108

Closed lea-danics closed 3 months ago

lea-danics commented 3 months ago

Describe the issue:

I face an error when I'm trying to run suite2p form GUI. I set the data_path where my .tif files are located (C:\Users\danic\CaImaging\tiffiles\green) and press RUN, but nothing happens, and in terminal window the below copied error pops up. (I tried with .h5 file as well) Could you please help me, what would be the problem?

Reproduce the code example:

loaded default ops

Error message:

Traceback (most recent call last):
  File "C:\Users\danic\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\rungui.py", line 441, in run_S2P
    pretrained_model_path = model_path(pretrained_model_string, 0, True)
TypeError: model_path() takes from 1 to 2 positional arguments but 3 were given

Version information:

suite2p v0.14.3

Context for the issue:

No response

bbaserdem commented 3 months ago

I'm having the exact same issue; trying to run as described in the tutorial page.

chriski777 commented 3 months ago

Hi all, this should be fixed in the newest release on pip. Can y'all reinstall suite2p and make sure that the version you have is 0.14.4? I'll close this for now but feel free to reply and reopen this issue if the issue persists.

bbaserdem commented 3 months ago

That solves it. I just installed suite2p yesterday, and used conda install to install it which gave me v0.14.3. (Might have been an invisible mistake on my end, just started using anaconda to manage my environment.) Upgrading via pip within the suite2p environment solved my issue.