The weighted masks ops.npy file output contains a value of zero for the diameter. When loading this file into the suite2p UI, a divide by zero error is raised (see below)
Reproduce the code example:
n/a: Using UI
Error message:
Traceback (most recent call last):
File "C:\Users\jinho.kim\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\gui2p.py", line 135, in dropEvent
io.load_proc(self)
File "C:\Users\jinho.kim\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\io.py", line 308, in load_proc
load_to_GUI(parent, basename, output)
File "C:\Users\jinho.kim\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\io.py", line 334, in load_to_GUI
make_masks_and_enable_buttons(parent)
File "C:\Users\jinho.kim\Anaconda3\envs\suite2p\lib\site-packages\suite2p\gui\io.py", line 94, in make_masks_and_enable_buttons
parent.xyrat = parent.ops["diameter"][0] / parent.ops["diameter"][1]
ZeroDivisionError: division by zero
Describe the issue:
We use suite2p to run segmentation on our motion corrected files. We set the arguments to run cellpose segmentation in suite2p as follows:
The weighted masks ops.npy file output contains a value of zero for the diameter. When loading this file into the suite2p UI, a divide by zero error is raised (see below)
Reproduce the code example:
Error message:
Version information:
v0.10.2 (suite2p processing) 0.11.2.dev51+g8f1a088 (suite2p GUI)
Context for the issue:
No response