MrGiovanni / ModelsGenesis

[MICCAI 2019 Young Scientist Award] [MEDIA 2020 Best Paper Award] Models Genesis
Other
740 stars 140 forks source link

Not able to fine tune nnUNet with the "competition" style fine-tuning method #55

Open adwaykanhere opened 2 years ago

adwaykanhere commented 2 years ago

Hi @MrGiovanni @sbajpai2,

Thank you so much for all your work, it is fantastic!

I'm following the method "Usage of the pre-trained nnU-Net" from the competition folder, but I'm having my own dataset. Essentially, I'm trying to fine-tune nnUNet + Model genesis to my own data. I've followed all the steps as per your usage here.

When I start my nnUNet fine-tuning at step 3, I don't see any message like ""############################################### Loading pre-trained Models Genesis from " or even '############################################### Training from scratch'.

I'm only able to see the nnUNet's usual log messages. I have ensured that I'm correctly following all the steps shown.

Could you please suggest where I'm going wrong?