missing genomes in genome_info.tsv files.

[jehaab]

Hello, I used profile on metagenome assembled genomes I recovered from my samples. However some are missing from the genome_info.tsv files. I guess it's just that the MAGs were not detected in my samples, but just wanted to make sure it is normal.

Thank you in advance for your answer,

Jehane

[MrOlm]

Hello,

Yes, if you use database_mode only genomes with at least 1x coverage will be reported. If you don’t use the database_mode flag, all genomes with at least 1 mapped read will be reported

[jehaab]

Thank you for your answer, have a good day