How to calculate the pN/pS value of similar function genes

MrOlm / inStrain

Bioinformatics program inStrain

MIT License

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How to calculate the pN/pS value of similar function genes #155

Closed haihao999 closed 1 year ago

haihao999 commented 1 year ago

Hi,Matt When evaluating the pN/pS values of similarly functioning genes, is it more appropriate to treat them as one long sequence or taking an average of all the genes? Thanks! yanpeng

MrOlm commented 1 year ago

Hi @haihao999 - that's a great question. I think both of the approaches you describe would work fine, but I'm not sure which is the "correct" way to do it.

Best, Matt