Murali-group / CyGraphSpace

A GraphSpace app for Cytoscape

GNU General Public License v3.0

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Beta release update #18

Closed LHuang2019 closed 6 years ago

LHuang2019 commented 6 years ago

The pull request consists of all the changes across various issues for beta release.

--------------------UI Update---------------------------------

14 Move export/update network processes into the background.

17 Update authentication dialog

Block user access to cytoscape app until user login/cancel the dialog.
Disable login button if host/username/password field is empty.
Show proper error message when user inputs invalid host.

9 GUI Update

disable CyGraphSpace options when no network is selected.
create pop up window when export/update network success or fail.

15 New logo created for the menu action in Cytoscape.

-------------Code Improvement-----------------------

12 Internal code refactor on various classes to remove redundant code, improve modularity, and closer to OSGi design pattern.

7 Refactor code base to remove hack with Thread.sleep() when export network

--------------Bug fix--------------------------------------

16 CyGraphSpace fails to upload large network

Temporary fix.
Add error message prevent user from uploading network with more than 400 nodes.

13 Fix the issue where graph does not get uploaded with correct layout style.

8 Fix the issue where CyGraphSpace causes Cytoscape to crash

6 Fix the issue where CyGraphSpace popup window is now shown in the foreground.