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Murali-group
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supervised-grns
Supervised inference of gene regulatory networks from single-cell RNA-sequencing data
GNU General Public License v3.0
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Added Early Stopping, summary writing
#23
malabikasen
closed
3 years ago
0
Fix for #21
#22
malabikasen
closed
3 years ago
0
Fix the aggregated statistics computation module to include different parameters
#21
malabikasen
closed
3 years ago
0
Fix for issue #19;
#20
malabikasen
closed
3 years ago
0
Remove dummy edges from set of positive edges used for loss computation
#19
malabikasen
closed
3 years ago
0
Add logging, format metric values, add min_epoch #17
#18
malabikasen
closed
3 years ago
1
Add logging to measure runtime; add min_epochs param via config file; format metric values to 3 significant digits
#17
malabikasen
closed
3 years ago
0
statAggregated.csv Columns
#16
SaraAmd
closed
3 years ago
0
compute AUROC and AUPRC score
#15
malabikasen
opened
3 years ago
0
Compute AUPRC and AUROC using prroc R package
#14
malabikasen
closed
3 years ago
0
Add edge from missingTF to present nodes #12
#13
malabikasen
closed
3 years ago
0
Reconnect nodes of degree zero in the graph
#12
malabikasen
opened
3 years ago
2
Issue10 Generate a random seed during the run
#11
malabikasen
closed
3 years ago
5
Generate a random seed during the run
#10
malabikasen
closed
3 years ago
1
Cs5854
#9
SaraAmd
opened
3 years ago
0
Added .gitignore file, uncomment parseOutput and Issue #2 to take in kFolds from config
#8
malabikasen
closed
3 years ago
0
.gitignore file to ignore .pyc files
#7
malabikasen
closed
3 years ago
0
Update Documentation with detailed installation steps
#6
malabikasen
closed
3 years ago
0
Updated installation steps
#5
malabikasen
closed
3 years ago
0
Overall auc score
#4
malabikasen
closed
3 years ago
1
overall AUC compute
#3
malabikasen
closed
3 years ago
0
Set up k-fold validation for any k and obtain results
#2
tmmurali
opened
3 years ago
3
Compute precision-recall curves and ROC curves after combining folds
#1
tmmurali
closed
3 years ago
4