Some issues are fundamental, like malformed records which need to be fixed in the mod itself, while others can be fixed in a patch overriding the record.
Analyzers should have some way to communicate that they're no longer a problem if the overriding record doesn't have the same issue. Users should be able to filter out bugs that are in a base mod that have been fixed in a patch.
But they should still retain the ability to display issues found per mod, as maybe someone is interested in detecting and fixing the issue in the base mod.
Some issues are fundamental, like malformed records which need to be fixed in the mod itself, while others can be fixed in a patch overriding the record.
Analyzers should have some way to communicate that they're no longer a problem if the overriding record doesn't have the same issue. Users should be able to filter out bugs that are in a base mod that have been fixed in a patch.
But they should still retain the ability to display issues found per mod, as maybe someone is interested in detecting and fixing the issue in the base mod.