first attempt at correcting code for single library layout

NAL-i5K / NAL_RNA_seq_annotation_pipeline

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first attempt at correcting code for single library layout #61

Closed mpoelchau closed 10 months ago

mpoelchau commented 10 months ago

Tested this on the Bombus huntii dataset that demonstrated the problem, and a M. sexta dataset with one Illumina paired and one Illumina single library.