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NAL-i5K
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NAL_RNA_seq_annotation_pipeline
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Don't allow failure
#12
hsiaoyi0504
opened
6 years ago
0
document update after adding picard and gatk3
#11
hsiaoyi0504
closed
6 years ago
0
Modify setup.py to make it can be installed by pip
#10
hsiaoyi0504
opened
6 years ago
0
Add picard and gatk 3
#9
hsiaoyi0504
closed
6 years ago
0
Download SRA files if they don't exist
#8
hsiaoyi0504
opened
6 years ago
0
Only do HISAT2 build once
#7
hsiaoyi0504
opened
6 years ago
0
Make setup.py as a standard installation method for installing a python package
#6
hsiaoyi0504
closed
6 years ago
0
Alternative tools for trimming
#5
hsiaoyi0504
opened
6 years ago
0
Make pipeline as a python package
#4
hsiaoyi0504
closed
6 years ago
1
For single-end data, guess adapter from FastQC output
#3
hsiaoyi0504
opened
6 years ago
0
Standardize the quality score of output of Trimmomatic to Phred+33
#2
hsiaoyi0504
closed
6 years ago
1
Collect output messages of tools used.
#1
hsiaoyi0504
closed
6 years ago
0
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