Organism onboarding project

NAL-i5K / Organism_Onboarding

A workflow to make organism onboarding pipeline easy to handle as an I/O pipeline

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Organism onboarding project #69

Closed r06942072 closed 4 years ago

r06942072 commented 5 years ago

The materials: Organism onboarding repo(i.e. CWL repo) (include setup.sh) https://github.com/NAL-i5K/Organism_Onboarding Apollo2 repo https://gitlab.com/i5k_Workspace/apollo2_all Django-webapp repo https://github.com/NAL-i5K/genomics-workspace

Getting-started: Step1. git clone [CWL-project] Step2. cd [CWL-project], run ./setup.sh (linux shell scripts) Step3. Edit job-[gggsss].yml file Step4. run cwl-runner

r06942072 commented 5 years ago

The result after running two organism where? on Ubuntu 18.04.

BTW Sorry for my ugly terminal ><" 0710_2organisms

mpoelchau commented 4 years ago

Closing this - can use other issues to track progress.