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organism taxid is required #36

Closed mpoelchau closed 4 years ago

mpoelchau commented 5 years ago

In our Tripal3 organism setup, taxid is required. I'm guessing this is because we are using the chado organism input page as the place for new users to submit organism information, and we've been requiring the organism ID.

In editing one of our existing organisms (add an image), I got the warning that taxid was required. I entered it, and then got the following error:

taxid_error

@bradfordcondon do you know why I'm getting that error?

A separate issue is to revisit the whole taxid is required thing. For now it might be easier to drop this requirement. We will need to revisit the whole workflow of having users onboard data with Tripal HQ + Tripal eutils, anyway.

bradfordcondon commented 5 years ago

I have this error on my copy too.

Setting the field to optional does not resolve.

I thought maybe the fieldgroup I put them in is the problem, but couldnt recreate the problem with just that. Some combination of the fieldset AND the property?

bradfordcondon commented 5 years ago

I deleting the tax_id property and the fieldgroup they were all in:

Now I just get this error

Could not save the TripalEntity: Could not insert Chado record into table: "organism": Array ( [abbreviation] => jlkjklj [species] => jlkjlkj [genus] => jkjlkj [comment] => jlkjlkj [common_name] => __NULL__ [type_id] => __NULL__ [infraspecific_name] => __NULL__ )

I can create other content type still.

New idea: its the analsyis linker field, as its not displaying correctly either...

edit--- nope, i deleted all the manage_analyses linker fields and we still have this error... what the heck is going on?

I deleted the bundle and recreated it- that resolved hte problem. lets see if i can figure out which field specifically broke us.

mpoelchau commented 4 years ago

This seems to be resolved (not getting the same error on the midspin site). Closing.