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NAL-i5K / tripal_eutils

ncbi loader via the eutils interface
GNU General Public License v3.0
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FTP Timeouts #232

Closed Ferrisx4 closed 1 year ago

Ferrisx4 commented 2 years ago

Recently, FTP requests to NCBI have been timing out. Looking at official documentation now, but it does not seem to be a change on NCBI's system. An example error from Tripal Eutils attempt:

file_get_contents(ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/895/GCA_000516895.1_LocustGenomeV1/GCA_000516895.1_LocustGenomeV1_assembly_stats.txt):[warning]
failed to open stream: Failed to set up data channel: Connection timed out EFTP.inc:35

However, running file_get_contents with the same resource outside of Tripal (basic PHP) works without issue. Currently looking into how Tripal Eutils forms the request.

dsenalik commented 1 year ago

Closed with merged pull request #246