NBISweden / AGAT

Another Gtf/Gff Analysis Toolkit
GNU General Public License v3.0
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add genetic code selection to agat_sp_extract_sequences.pl #357

Closed JWDebler closed 1 year ago

JWDebler commented 1 year ago

Is your feature request related to a problem? Please describe. I was wondering why a subset of my proteins had stop codons until I realised those where the annotations from the mitochondrion which uses a different genetic code.

Describe the solution you'd like add a switch to select which genetic code to use for the extraction

JWDebler commented 1 year ago

found the 'codon table' flag :-)