agat_convert_genscan2gff: --inflate-off is not a parameter

Leila011 commented 3 months ago

Describe the bug In agat_convert_genscan2gff, the help mention a parameter --inflate-off, it is also in the list of parameters in the source code but doe snot seems to be use anywhere in the code.

General (please complete the following information):

AGAT version: 1.4.0
AGAT installation/use: container from quay.io
OS: FEDORA

To Reproduce docker run quay.io/biocontainers/agat:1.4.0--pl5321hdfd78af_0 agat_convert_genscan2gff.pl --help agat_convert_genscan2gff source code

Expected behavior Parameters listed in the help should exists

Screenshots

Additional context

Juke34 commented 3 months ago

Thank you for the feedback. This is a remaining from another script used to develop this one. This has no place here. I will remove that.

Juke34 commented 2 months ago

Fixed in last PR

NBISweden / AGAT

agat_convert_genscan2gff: --inflate-off is not a parameter #477