Hi!
I am using the singularity on school's computation cluster. After building the sif image of AGAT-1.4.1, I had an error. The processes is shown below:
$module load singularity/3.11.3
$singularity pull docker://quay.io/biocontainers/agat:1.4.1--pl5321hdfd78af_0
$singularity run /pub/jenyuw/Software/agat_1.4.1--pl5321hdfd78af_0.sif
Singularity> agat_convert_sp_gxf2gxf.pl --help
ListUtil.c: loadable library and perl binaries are mismatched (got handshake key 0xcd00080, needed 0xed00080)
In addition, I had tried installation thorugh conda, micromamba, and manual way but all failed. I tried our systems perl modules and both failed.
For example I used module load perl/5.30.0 R/4.3.3 (or perl/5.34.1) and both gave me the following message during the make test step. No error messaged at the dependency installation or the make stage.
Hi! I am using the singularity on school's computation cluster. After building the sif image of AGAT-1.4.1, I had an error. The processes is shown below:
In addition, I had tried installation thorugh conda, micromamba, and manual way but all failed. I tried our systems perl modules and both failed. For example I used
module load perl/5.30.0 R/4.3.3(or perl/5.34.1) and both gave me the following message during themake teststep. No error messaged at the dependency installation or the make stage.Please tell me if I need to provide more info. Thank you!