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NBISweden / Earth-Biogenome-Project-pilot

Assembly and Annotation workflows for analysing data in the Earth Biogenome Project pilot project.
https://www.earthbiogenome.org/
GNU General Public License v3.0
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Add inspector #11

Closed mahesh-panchal closed 2 years ago

mahesh-panchal commented 2 years ago

Adds the tool inspector.

Test:

$ nextflow run -c tests/configs/test_data.config -profile docker_local -main-script tests/modules/inspector/test_inspector.nf -entry TEST_INSPECTOR .
N E X T F L O W  ~  version 21.10.0
Launching `tests/modules/inspector/test_inspector.nf` [ecstatic_nightingale] - revision: 2efea42c5a
executor >  local (1)
[6e/58623c] process > TEST_INSPECTOR:INSPECTOR [100%] 1 of 1 ✔

Closes #10

Fix Kat path: Test:

$ nextflow run -c tests/configs/test_data.config -profile docker_local -main-script tests/modules/kat/kat_comp/test_kat_comp.nf -entry TEST_KAT_COMP .
N E X T F L O W  ~  version 21.10.0
Launching `tests/modules/kat/kat_comp/test_kat_comp.nf` [friendly_ptolemy] - revision: aceb5078c4
executor >  local (1)
[fe/ba2481] process > TEST_KAT_COMP:KAT_COMP [100%] 1 of 1 ✔