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NBISweden / Earth-Biogenome-Project-pilot

Assembly and Annotation workflows for analysing data in the Earth Biogenome Project pilot project.
https://www.earthbiogenome.org/
GNU General Public License v3.0
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nf-core modules ploidyplot module has spelling mistake in channel names #99

Closed mahesh-panchal closed 2 weeks ago

mahesh-panchal commented 1 month ago 
    output:
    tuple val(meta), path("*.fi.png"), emit: filled_plodiy_plot_png , optional: true
    tuple val(meta), path("*.fi.pdf"), emit: filled_plodiy_plot_pdf , optional: true
    tuple val(meta), path("*.ln.png"), emit: line_plodiy_plot_png   , optional: true
    tuple val(meta), path("*.ln.pdf"), emit: line_plodiy_plot_pdf   , optional: true
    tuple val(meta), path("*.st.png"), emit: stacked_plodiy_plot_png, optional: true
    tuple val(meta), path("*.st.pdf"), emit: stacked_plodiy_plot_pdf, optional: true
    path "versions.yml"              , emit: versions

should be:

    output:
    tuple val(meta), path("*.fi.png"), emit: filled_ploidy_plot_png , optional: true
    tuple val(meta), path("*.fi.pdf"), emit: filled_ploidy_plot_pdf , optional: true
    tuple val(meta), path("*.ln.png"), emit: line_ploidy_plot_png   , optional: true
    tuple val(meta), path("*.ln.pdf"), emit: line_ploidy_plot_pdf   , optional: true
    tuple val(meta), path("*.st.png"), emit: stacked_ploidy_plot_png, optional: true
    tuple val(meta), path("*.st.pdf"), emit: stacked_ploidy_plot_pdf, optional: true
    path "versions.yml"              , emit: versions

plodiy -> ploidy

mahesh-panchal commented 2 weeks ago

Patched with https://github.com/nf-core/modules/pull/5826