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NBISweden / IgDiscover-legacy

Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads
https://www.igdiscover.se
MIT License
17 stars 10 forks source link

Solving environment: failed #116

Closed pursellta closed 3 years ago

pursellta commented 3 years ago

I am trying to install IgDiscover and am having issues; I have tried both on my Mac and on a linux server. I installed miniconda (version 4.10.3) and followed the instructions on the installation page to the letter and I keep getting this error:

Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source. Collecting package metadata (repodata.json): done Solving environment: -

And then it never finishes. I have tried making the channel order flexible as well as creating the environment separately, activating it, and then trying to install. I can't seem to get it to work.

marcelm commented 3 years ago

This could be a transient failure, so you may just need to try again, but you can also try to use mamba instead of conda: "conda install mamba", then write "mamba" instead of "conda" when installing IgDiscover.

pursellta commented 3 years ago

This could be a transient failure, so you may just need to try again, but you can also try to use mamba instead of conda: "conda install mamba", then write "mamba" instead of "conda" when installing IgDiscover.

I tried again and it didn't work. The "mamba" work around seems to have solved the problem though so thank you!