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NBISweden / IgDiscover-legacy

Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads
https://www.igdiscover.se
MIT License
17 stars 10 forks source link

Cannot install IgDiscover on M1 MacBook Pro #120

Closed kllenart closed 1 year ago

kllenart commented 1 year ago

I have a MacBook Pro (13-inch, M1, 2020) with Apple M1 processor. Installation of Bioconda and the channels was successful. When I follow the installation instructions on the website I get the following error:

IgDiscover install failed
marcelm commented 1 year ago

Hi Klara, I think the problem is that Bioconda does not provide native packages for the M1 processor. However, you can tell it to use the packages built for x86 Macs using a "subdir" setting and that appears to work.

I think this may work:

CONDA_SUBDIR=osx-64 conda create -n igdiscover igdiscover
kllenart commented 1 year ago

Hi Marcel,

thank you for a quick reply, this worked and I managed to install it!

marcelm commented 1 year ago

Oh great to know! I have updated the installation instructions to reflect this.