_pickle.PicklingError

[marcelm]

Originally reported by: Marcel Martin (Bitbucket: marcelm, GitHub: marcelm)

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We suffer from snakemake issue 257. The current workaround is to avoid Python 3.5 and use 3.4 instead.

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• Bitbucket: https://bitbucket.org/igdiscover/igdiscover/issue/28

[marcelm]

Original comment by Marcel Martin (Bitbucket: marcelm, GitHub: marcelm):

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Require Snakemake >=3.9.0

That version contains two fixes that we need:

• Time granularity bug: https://bitbucket.org/snakemake/snakemake/pull-requests/112
• _pickle.PicklingError on Pythen 3.5: https://bitbucket.org/snakemake/snakemake/issues/257/

Closes #28

[marcelm]

Original comment by Marcel Martin (Bitbucket: marcelm, GitHub: marcelm):

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snakemake 3.9.0 has fixed this. bioconda packages are already available, so we just need to update the dependency.