* igdiscover/init.py: Allow species specific options in config

NBISweden / IgDiscover-legacy

Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads

https://www.igdiscover.se

MIT License

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Closed mateuszatki closed 10 months ago

mateuszatki commented 5 years ago

This is the first step towards species specific default yaml config.
Default is 'any' species with a possibility of initializing with 'human'.
Current code for updating yaml file is wrapped into function, to update default yaml config depending on whether species specific initialization is called.

This way we can keep maintaining single default yaml file and have species specific defaults.

marcelm commented 10 months ago

This repository is outdated and is going to be archived. Please see the new repository at https://gitlab.com/gkhlab/igdiscover22/ or the homepage at https://www.igdiscover.se/ for the most recent and maintained IgDiscover version.