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NBISweden / IgDiscover-legacy

Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads
https://www.igdiscover.se
MIT License
17 stars 10 forks source link

discover: Use all CDR3s to compute shared ratio #90

Closed mateuszatki closed 10 months ago

mateuszatki commented 5 years ago

Calculate shared_CDR3_ratio on all CDR3s instead of using different sequences for nominator and denominator.

marcelm commented 5 years ago

Thanks, this is good to have as a PR. Let’s use this for testing of the testing pipeline. We probably need to update the documentation before it gets merged, though.

marcelm commented 10 months ago

This repository is outdated and is going to be archived. Please see the new repository at https://gitlab.com/gkhlab/igdiscover22/ or the homepage at https://www.igdiscover.se/ for the most recent and maintained IgDiscover version.