MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:
I have been running mrbayes with the stepping stone option for comparison of tree topologies in a server and I reached the limit time in the server, so the analysis stoped. I want to restart the analysis from the checkpoint, added the append = yes to my nexus file, but I got this error:
Expecting NEXUS formatted file
Reading trees block
Successfully read tree 'mcmc.tree_1'
Successfully read tree 'mcmc.tree_2'
Successfully read tree 'mcmc.tree_3'
Successfully read tree 'mcmc.tree_4'
Successfully read tree 'mcmc.tree_5'
Successfully read tree 'mcmc.tree_6'
Successfully read tree 'mcmc.tree_7'
Successfully read tree 'mcmc.tree_8'
Exiting trees block
Reading mrbayes block
The parameter 'Tau' is fixed so the starting value cannot be set
There was an error on at least one processor
The error occurred when reading char. 11-11 on line 95
in the file 'HG_75_tree_SC4.nex.ckp'
Returning execution to calling file ...
Error in command "Ss"
There was an error on at least one processor
The error occurred when reading char. 3-3 on line 53376
in the file 'HG_75_tree_SC4.nex'
Returning execution to command line ...
Error in command "Execute"
I have been running mrbayes with the stepping stone option for comparison of tree topologies in a server and I reached the limit time in the server, so the analysis stoped. I want to restart the analysis from the checkpoint, added the append = yes to my nexus file, but I got this error:
I don't know how to fix it.
Thanks in advance
Marta