Closed LeandroRitter closed 1 year ago
I made a number of changes, trying to make aMeta follow up all detected by KrakenUniq species instead of pathogens only. Previously it was too pathogen oriented, now we deliver all followup stats for all detected microbes (including pathogens, if present, of course). This commit should fix a few issues such as https://github.com/NBISweden/aMeta/issues/122, https://github.com/NBISweden/aMeta/issues/120, https://github.com/NBISweden/aMeta/issues/119, https://github.com/NBISweden/aMeta/issues/84
I made a number of changes, trying to make aMeta follow up all detected by KrakenUniq species instead of pathogens only. Previously it was too pathogen oriented, now we deliver all followup stats for all detected microbes (including pathogens, if present, of course). This commit should fix a few issues such as https://github.com/NBISweden/aMeta/issues/122, https://github.com/NBISweden/aMeta/issues/120, https://github.com/NBISweden/aMeta/issues/119, https://github.com/NBISweden/aMeta/issues/84