NBISweden / aMeta

Ancient microbiome snakemake workflow
MIT License
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Post_Processing rule fails due to missing input data? #62

Closed percyfal closed 2 years ago

percyfal commented 2 years ago

Sometimes rule Post_Processing fails with the following error message:

Read 1 item
Error in image.default(x = 1:ncol(red.res), y = 1:nrow(red.res), z = t(red.res),  : 
  increasing 'x' and 'y' values expected
image.default
Execution halted

There are no downstream rules that depend on Post_Processing output so better error handling would let the workflow run to completion, which is preferred.

percyfal commented 2 years ago

Fixed via #59