Add test data - Githubissues

MalinAhlberg commented 8 months ago

Test data created by the EJP-RD NBIS team should be added to the data folder

wna-se commented 8 months ago

I will add test data inspired by the B1MG demonstrator (D4.2, YouTube)

Likely work:

[ ] README.md and/or a script/manifest that can be used to extract/download a subset of the files and metadata from the Rare Disease Synthetic Dataset (EGAD00001008392)
[ ] Test data for the FAIR-in-a-Box instance including a minimal resource described according to the EJP-RD Metadata model with a Dataset, Data Distribution and Data service.
[ ] Test data for the CARE-SM Beacon endpoint.

wna-se commented 8 months ago

I will add test data based on the scenario discussed with the clinical genomics lab at Lumc

[ ] Test data for the FAIR-in-a-Box instance including a minimal resource described according to the EJP-RD Metadata model with a Dataset, Data Distribution and Data service to identify resources that have the relevant imaging and patient data and that supports data provisioning through SPARQL and CARE-SM and Vantage6 / containerised compute.
[ ] Test data for running SPARQL queries using CARE-SM to select imaging outputs associated with a patient age, and return the patient age and corresponding IRI:s to images.

NBISweden / ejprd