Prepare for real data - Githubissues

NBISweden / encam

Encyclopedia of Cancer Microenvironment

http://encima.one

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Prepare for real data #128

Closed jonandernovella closed 2 years ago

jonandernovella commented 2 years ago

Drop columns with too little variance (or None) for survival analysis
NaN/Inf data points are dropped from survival analysis
Added test for real data
Pre-process data to get consistent values (yes/no)
Allow using other datasets than SIM.csv