Interproscan - Githubissues

NBISweden / pipelines-nextflow

A set of workflows written in Nextflow for Genome Annotation.

GNU General Public License v3.0

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Closed MartinPippel closed 8 months ago

MartinPippel commented 8 months ago

replace local interproscan module (that is used in the functional annotation pipeline) with the NF-core module

this step can now run in parallel
cpus are set to 4 by default, which needs to tested and verified on real samples

mahesh-panchal commented 8 months ago

You also need to update the test config to use max 4 cores for interproscan. See failing actions.

mahesh-panchal commented 8 months ago

Ready to merge?