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NBISweden / pipelines-nextflow

A set of workflows written in Nextflow for Genome Annotation.
GNU General Public License v3.0
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[functional annotation] #66

Open Juke34 opened 2 years ago

Juke34 commented 2 years ago

@Mahesh You already mentioned the FA-nf pipeline, might be a good alternative to ours. They would like to reimplement it in DSL2 maybe we could join our efforts and create a unique pipeline, or use their as an alternative.

mahesh-panchal commented 2 years ago

It would be nice to do, but I'm already lagging converting ours. I'm going to see if we can use some students to make nf-core modules for ours.

Juke34 commented 2 years ago

I'm going to see if we can use some students to make nf-core modules for ours.

That would be awesome

mahesh-panchal commented 9 months ago

Catching up on some issues. Our workflows have since made the jump to using nf-core modules. It doesn't look like FA-nf has, or made any updates since last year. Is there something specific that could be done here to address the issue or should we close the issue?