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NBISweden / pipelines-nextflow

A set of workflows written in Nextflow for Genome Annotation.
GNU General Public License v3.0
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The problem with installation. #77

Closed unavailable-2374 closed 1 year ago

unavailable-2374 commented 1 year ago

hello there, I want to use this beautiful tool for annotating my genome , but I can't install it.

could you please help me?

this is my log when I try to install it.

''' [caoshuo@login04 tools]$ curl -s https://get.nextflow.io | bash /usr/bin/md5sum: 第 2 行:[: ==: 期待一元表达式 CAPSULE: Downloading dependency dev.failsafe:failsafe:jar:3.1.0 CAPSULE EXCEPTION: Error resolving dependencies. while processing attribute Allow-Snapshots: false (for stack trace, run with -Dcapsule.log=verbose) Unable to initialize nextflow environment '''

thanks!

best wishes.

mahesh-panchal commented 1 year ago

H, sorry for the delay. I was on holiday.

I'm sorry, but I'm not sure exactly what the error is here. This is a question for the Nextflow developers https://github.com/nextflow-io/nextflow/issues. However, before making another issue, try one of their other installation methods such as

wget -qO- https://get.nextflow.io | bash

Or try installing via conda/mamba for example.

I hope this helps.