Pipeline command enter and err code: -9

[AbadJavier]

Hi, I'm new to using SPAdes so I don't know how to enter some commands Could someone tell me how to add the pipeline commands, I already ran my sequence, it stayed in k55 and it sends this error message

== Error == system call for: "['/usr/lib/spades/bin/spades-core', '/home/javier/Descargas/SPAdes-3.15.4-Linux/bin/Secuences/SRS2737848_s/K55/configs/config.info']" finished abnormally, err code: -9

======= SPAdes pipeline finished abnormally and WITH WARNINGS!

=== Error correction and assembling warnings:

• 2:03:30.757 724M / 1G WARN General (simplification.cpp : 479) The determined erroneous connection coverage threshold may be determined improperly
• 2:22:45.785 948M / 1G WARN General (kmer_coverage_model.cpp : 218) Too many erroneous kmers, the estimates might be unreliable
• 2:23:05.838 948M / 1G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 3 ======= Warnings saved to /home/javier/Descargas/SPAdes-3.15.4-Linux/bin/Secuences/SRS2737848_s/warnings.log

=== ERRORs:

• system call for: "['/usr/lib/spades/bin/spades-core', '/home/javier/Descargas/SPAdes-3.15.4-Linux/bin/Secuences/SRS2737848_s/K55/configs/config.info']" finished abnormally, err code: -9

I would greatly appreciate your help

[mahesh-panchal]

Hi, to help further, it would be helpful if you could post what command you used, what system you're running on, and how you've installed Spades.

I would like to note that the repository in which you've created this issue is now outdated, and you'll likely receive better help on the Spades Github repository: https://github.com/ablab/spades.