Cannot compile with on Centos 6

Compiling WRF on Centos 6 with Netcdf 4 fails:

/share/el6.x86_64/opt/netcdf/f/4.4.5/gcc/7.3.0/lib/libnetcdff.so: undefined reference to `nc_inq_path'
/share/el6.x86_64/opt/netcdf/f/4.4.5/gcc/7.3.0/lib/libnetcdff.so: undefined reference to `nc_open_mem'
/share/el6.x86_64/opt/netcdf/f/4.4.5/gcc/7.3.0/lib/libnetcdff.so: undefined reference to `nc_inq_var_filter'
/share/el6.x86_64/opt/netcdf/f/4.4.5/gcc/7.3.0/lib/libnetcdff.so: undefined reference to `nc_def_var_filter'
/share/el6.x86_64/opt/netcdf/f/4.4.5/gcc/7.3.0/lib/libnetcdff.so: undefined reference to `nc_rename_grp'

Here's the output of my ./configure:

[itaylor@aeolus WRFV3]$ ./configure 
checking for perl5... no
checking for perl... found /usr/bin/perl (perl)
Will use NETCDF in dir: /share/el6.x86_64/opt/netcdf/f/4.4.5/gcc/7.3.0
Will use HDF5 in dir: /share/el6.x86_64/opt/hdf5/1.10.5/gcc/7.3.0
PHDF5 not set in environment. Will configure WRF for use without.
Will use 'time' to report timing information
$JASPERLIB or $JASPERINC not found in environment, configuring to build without grib2 I/O...
------------------------------------------------------------------------
Please select from among the following Linux x86_64 options:

  1. (serial)   2. (smpar)   3. (dmpar)   4. (dm+sm)   PGI (pgf90/gcc)
  5. (serial)   6. (smpar)   7. (dmpar)   8. (dm+sm)   PGI (pgf90/pgcc): SGI MPT
  9. (serial)  10. (smpar)  11. (dmpar)  12. (dm+sm)   PGI (pgf90/gcc): PGI accelerator
 13. (serial)  14. (smpar)  15. (dmpar)  16. (dm+sm)   INTEL (ifort/icc)
                                         17. (dm+sm)   INTEL (ifort/icc): Xeon Phi (MIC architecture)
 18. (serial)  19. (smpar)  20. (dmpar)  21. (dm+sm)   INTEL (ifort/icc): Xeon (SNB with AVX mods)
 22. (serial)  23. (smpar)  24. (dmpar)  25. (dm+sm)   INTEL (ifort/icc): SGI MPT
 26. (serial)  27. (smpar)  28. (dmpar)  29. (dm+sm)   INTEL (ifort/icc): IBM POE
 30. (serial)               31. (dmpar)                PATHSCALE (pathf90/pathcc)
 32. (serial)  33. (smpar)  34. (dmpar)  35. (dm+sm)   GNU (gfortran/gcc)
 36. (serial)  37. (smpar)  38. (dmpar)  39. (dm+sm)   IBM (xlf90_r/cc_r)
 40. (serial)  41. (smpar)  42. (dmpar)  43. (dm+sm)   PGI (ftn/gcc): Cray XC CLE
 44. (serial)  45. (smpar)  46. (dmpar)  47. (dm+sm)   CRAY CCE (ftn $(NOOMP)/cc): Cray XE and XC
 48. (serial)  49. (smpar)  50. (dmpar)  51. (dm+sm)   INTEL (ftn/icc): Cray XC
 52. (serial)  53. (smpar)  54. (dmpar)  55. (dm+sm)   PGI (pgf90/pgcc)
 56. (serial)  57. (smpar)  58. (dmpar)  59. (dm+sm)   PGI (pgf90/gcc): -f90=pgf90
 60. (serial)  61. (smpar)  62. (dmpar)  63. (dm+sm)   PGI (pgf90/pgcc): -f90=pgf90
 64. (serial)  65. (smpar)  66. (dmpar)  67. (dm+sm)   INTEL (ifort/icc): HSW/BDW
 68. (serial)  69. (smpar)  70. (dmpar)  71. (dm+sm)   INTEL (ifort/icc): KNL MIC
 72. (serial)  73. (smpar)  74. (dmpar)  75. (dm+sm)   FUJITSU (frtpx/fccpx): FX10/FX100 SPARC64 IXfx/Xlfx

Enter selection [1-75] : 35
------------------------------------------------------------------------
Compile for nesting? (1=basic, 2=preset moves, 3=vortex following) [default 1]: 1

Configuration successful! 
------------------------------------------------------------------------
testing for MPI_Comm_f2c and MPI_Comm_c2f
   MPI_Comm_f2c and MPI_Comm_c2f are not supported
testing for MPI_Init_thread
   MPI_Init_thread is not supported
testing for fseeko and fseeko64
fseeko64 is supported
------------------------------------------------------------------------

# Settings for    Linux x86_64 ppc64le, gfortran compiler with gcc   (dm+sm)
#
DESCRIPTION     =       GNU ($SFC/$SCC)
DMPARALLEL      =        1
OMPCPP          =        -D_OPENMP
OMP             =        -fopenmp
OMPCC           =        -fopenmp
SFC             =       gfortran
SCC             =       gcc
CCOMP           =       gcc
DM_FC           =       mpif90 -f90=$(SFC)
DM_CC           =       mpicc -cc=$(SCC)
FC              =       time $(DM_FC)
CC              =       $(DM_CC) -DFSEEKO64_OK 
LD              =       $(FC)
RWORDSIZE       =       $(NATIVE_RWORDSIZE)
PROMOTION       =       #-fdefault-real-8
ARCH_LOCAL      =       -DNONSTANDARD_SYSTEM_SUBR  -DWRF_USE_CLM $(NETCDF4_IO_OPTS)
CFLAGS_LOCAL    =       -w -O3 -c 
LDFLAGS_LOCAL   =       
CPLUSPLUSLIB    =       
ESMF_LDFLAG     =       $(CPLUSPLUSLIB)
FCOPTIM         =       -O2 -ftree-vectorize -funroll-loops
FCREDUCEDOPT    =       $(FCOPTIM)
FCNOOPT     =       -O0
FCDEBUG         =       # -g $(FCNOOPT) # -ggdb -fbacktrace -fcheck=bounds,do,mem,pointer -ffpe-trap=invalid,zero,overflow
FORMAT_FIXED    =       -ffixed-form
FORMAT_FREE     =       -ffree-form -ffree-line-length-none
FCSUFFIX        =       
BYTESWAPIO      =       -fconvert=big-endian -frecord-marker=4
FCBASEOPTS_NO_G =       -w $(FORMAT_FREE) $(BYTESWAPIO)
FCBASEOPTS      =       $(FCBASEOPTS_NO_G) $(FCDEBUG)
MODULE_SRCH_FLAG =     
TRADFLAG        =      -traditional-cpp $(NETCDF4_IO_OPTS)
CPP             =      /lib/cpp -P -nostdinc
AR              =      ar
ARFLAGS         =      ru
M4              =      m4 -G
RANLIB          =      ranlib
RLFLAGS     =   
CC_TOOLS        =      $(SCC) 

###########################################################
######################
# POSTAMBLE

FGREP = fgrep -iq

ARCHFLAGS       =    $(COREDEFS) -DIWORDSIZE=$(IWORDSIZE) -DDWORDSIZE=$(DWORDSIZE) -DRWORDSIZE=$(RWORDSIZE) -DLWORDSIZE=$(LWORDSIZE) \
                     $(ARCH_LOCAL) \
                     $(DA_ARCHFLAGS) \
                      -DDM_PARALLEL \
                       \
                      -DNETCDF \
                       \
                       \
                       \
                       \
                       \
                      -DHDF5 \
                       \
                       \
                       \
                       \
                      -DUSE_ALLOCATABLES \
                      -DGRIB1 \
                      -DINTIO \
                      -DKEEP_INT_AROUND \
                      -DLIMIT_ARGS \
                      -DCONFIG_BUF_LEN=$(CONFIG_BUF_LEN) \
                      -DMAX_DOMAINS_F=$(MAX_DOMAINS) \
                      -DMAX_HISTORY=$(MAX_HISTORY) \
              -DNMM_NEST=$(WRF_NMM_NEST)
CFLAGS          =    $(CFLAGS_LOCAL) -DDM_PARALLEL  \
                      -DMAX_HISTORY=$(MAX_HISTORY) -DNMM_CORE=$(WRF_NMM_CORE)
FCFLAGS         =    $(FCOPTIM) $(FCBASEOPTS)
ESMF_LIB_FLAGS  =    
# ESMF 5 -- these are defined in esmf.mk, included above
 ESMF_IO_LIB     =    -L$(WRF_SRC_ROOT_DIR)/external/esmf_time_f90 -lesmf_time
ESMF_IO_LIB_EXT =    -L$(WRF_SRC_ROOT_DIR)/external/esmf_time_f90 -lesmf_time
INCLUDE_MODULES =    $(MODULE_SRCH_FLAG) \
                     $(ESMF_MOD_INC) $(ESMF_LIB_FLAGS) \
                      -I$(WRF_SRC_ROOT_DIR)/main \
                      -I$(WRF_SRC_ROOT_DIR)/external/io_netcdf \
                      -I$(WRF_SRC_ROOT_DIR)/external/io_int \
                      -I$(WRF_SRC_ROOT_DIR)/frame \
                      -I$(WRF_SRC_ROOT_DIR)/share \
                      -I$(WRF_SRC_ROOT_DIR)/phys \
                      -I$(WRF_SRC_ROOT_DIR)/chem -I$(WRF_SRC_ROOT_DIR)/inc \
                      -I$(NETCDFPATH)/include \

REGISTRY        =    Registry
CC_TOOLS_CFLAGS = -DNMM_CORE=$(WRF_NMM_CORE)

 LIB_BUNDLED     = \
                      $(WRF_SRC_ROOT_DIR)/external/fftpack/fftpack5/libfftpack.a \
                      $(WRF_SRC_ROOT_DIR)/external/io_grib1/libio_grib1.a \
                      $(WRF_SRC_ROOT_DIR)/external/io_grib_share/libio_grib_share.a \
                      $(WRF_SRC_ROOT_DIR)/external/io_int/libwrfio_int.a \
                      $(ESMF_IO_LIB) \
                      $(WRF_SRC_ROOT_DIR)/external/RSL_LITE/librsl_lite.a \
                      $(WRF_SRC_ROOT_DIR)/frame/module_internal_header_util.o \
                      $(WRF_SRC_ROOT_DIR)/frame/pack_utils.o 

 LIB_EXTERNAL    = \
                      -L$(WRF_SRC_ROOT_DIR)/external/io_netcdf -lwrfio_nf -L/share/el6.x86_64/opt/netcdf/f/4.4.5/gcc/7.3.0/lib -lnetcdff      -L/share/el6.x86_64/opt/hdf5/1.10.5/gcc/7.3.0/lib -lhdf5_fortran -lhdf5 -lm -lz

LIB             =    $(LIB_BUNDLED) $(LIB_EXTERNAL) $(LIB_LOCAL) $(LIB_WRF_HYDRO) $(NETCDF4_DEP_LIB)
LDFLAGS         =    $(OMP) $(FCFLAGS) $(LDFLAGS_LOCAL) 
ENVCOMPDEFS     =    
WRF_CHEM    =   0 
CPPFLAGS        =    $(ARCHFLAGS) $(ENVCOMPDEFS) -I$(LIBINCLUDE) $(TRADFLAG) 
NETCDFPATH      =    /share/el6.x86_64/opt/netcdf/f/4.4.5/gcc/7.3.0
HDF5PATH        =    /share/el6.x86_64/opt/hdf5/1.10.5/gcc/7.3.0
WRFPLUSPATH     =    
RTTOVPATH       =    
PNETCDFPATH     =    

bundled:  io_only 
external: io_only $(WRF_SRC_ROOT_DIR)/external/RSL_LITE/librsl_lite.a gen_comms_rsllite module_dm_rsllite $(ESMF_TARGET)
io_only:  esmf_time wrfio_nf   \
      wrf_ioapi_includes wrfio_grib_share wrfio_grib1 wrfio_int fftpack

######################
------------------------------------------------------------------------
Settings listed above are written to configure.wrf.
If you wish to change settings, please edit that file.
If you wish to change the default options, edit the file:
     arch/configure_new.defaults
NetCDF users note:
 This installation of NetCDF supports large file support.  To DISABLE large file
 support in NetCDF, set the environment variable WRFIO_NCD_NO_LARGE_FILE_SUPPORT
 to 1 and run configure again. Set to any other value to avoid this message.

cat /etc/os-release:

CentOS release 6.10 (Final)
LSB_VERSION=base-4.0-amd64:base-4.0-noarch:core-4.0-amd64:core-4.0-noarch:graphics-4.0-amd64:graphics-4.0-noarch
CentOS release 6.10 (Final)
Rocks release 6.0 (Mamba)
CentOS release 6.10 (Final)

NCAR / WRFV3

Cannot compile with on Centos 6 #5