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NCAR / lrose-core

Core C/C++ code for LROSE.
https://www.eol.ucar.edu/content/lidar-radar-open-software-environment
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LROSE Install Issues on NERC's JASMIN #75

Closed rrniii closed 4 years ago

rrniii commented 5 years ago

Hello All,

I have been trying to install lrose on our shared HPC and I keep getting the errors below.

I have followed the directions here:

https://github.com/NCAR/lrose-core/blob/master/docs/download/clone_src_and_build.linux.md

Our system is Lentos so I following the RedHat instructions but I am unable to do the two yum installs as I am not allowed root permissions.

I have also tried the non-git way (https://github.com/NCAR/lrose-core/blob/master/docs/download/download_src_and_build.linux.md) and got similar errors when it came to the make.

I have looked at the log files but cannot sort out what is the issue.

Please advise.

Cheers, Neely

Cannot open file: makefile ERROR - checkout_and_build_auto.py Cannot open file: makefile ERROR - checkout_and_build_auto.py Cannot open file: makefile ========================= setup-autoconf ========================= ====>> Creating log file: /gws/smf/j04/ncas_radar/software/lrose_build/logs/setup-autoconf.log <<== Running cmd: ./make_bin/createConfigure.am.py --dir . --baseName configure.base.shared --shared --pkg lrose-radx --verbose Log file is: /gws/smf/j04/ncas_radar/software/lrose_build/logs/setup-autoconf.log .... Child returned code: 0 done ========================= create-qt-moc-files ========================= ====>> Creating log file: /gws/smf/j04/ncas_radar/software/lrose_build/logs/create-qt-moc-files.log <<== ========================= build-netcdf ========================= ====>> Creating log file: /gws/smf/j04/ncas_radar/software/lrose_build/logs/build-netcdf.log <<== Running cmd: ./build_and_install_netcdf -x /gws/smf/j04/ncas_radar/software/lrose_build/scratch Log file is: /gws/smf/j04/ncas_radar/software/lrose_build/logs/build-netcdf.log .... Child returned code: 0 done ========================= print-environment ========================= ====>> Creating log file: /gws/smf/j04/ncas_radar/software/lrose_build/logs/print-environment.log <<== Running cmd: env Log file is: /gws/smf/j04/ncas_radar/software/lrose_build/logs/print-environment.log .... Child returned code: 0 done ========================= run-configure ========================= ====>> Creating log file: /gws/smf/j04/ncas_radar/software/lrose_build/logs/run-configure.log <<== Running cmd: ./configure --with-hdf5=/gws/smf/j04/ncas_radar/software/lrose_build/scratch --with-netcdf=/gws/smf/j04/ncas_radar/software/lrose_build/scratch --prefix=/gws/smf/j04/ncas_radar/software/lrose_build/scratch Log file is: /gws/smf/j04/ncas_radar/software/lrose_build/logs/run-configure.log .... Traceback (most recent call last): File "./checkout_and_build_auto.py", line 816, in main() File "./checkout_and_build_auto.py", line 269, in main buildPackage() File "./checkout_and_build_auto.py", line 601, in buildPackage shellCmd(cmd) File "./checkout_and_build_auto.py", line 799, in shellCmd retcode = subprocess.check_call(cmdToRun, shell=True) File "/usr/lib64/python2.6/subprocess.py", line 505, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command './configure --with-hdf5=/gws/smf/j04/ncas_radar/software/lrose_build/scratch --with-netcdf=/gws/smf/j04/ncas_radar/software/lrose_build/scratch --prefix=/gws/smf/j04/ncas_radar/software/lrose_build/scratch 1>> /gws/smf/j04/ncas_radar/software/lrose_build/logs/run-configure.log 2>&1' returned non-zero exit status 1

mjskier commented 5 years ago

Each step of the build creates its own log file. So for a more detailed error of what went wrong, look in Log file is: /gws/smf/j04/ncas_radar/software/lrose_build/logs/run-configure.log

My guess is that you are missing dependencies since you were not able to run the 2 yums commands.

mike-dixon commented 4 years ago

Sent an email directly to Ryan Neely at NCAS. New LROSE version is available.