/data/{queryId} sometimes doesn't always return pageSize # of results

NCATS-Tangerine / beacon-aggregator

A web service that operates over the Beacon network to provide a single software interface over the all the Beacons

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/data/{queryId} sometimes doesn't always return pageSize # of results #72

Open isuen opened 6 years ago

isuen commented 6 years ago

Try: searching ncbigene:3578 under /cliques ncbigene:3578 is part of clique ENSEMBL:ENST00000274520

Then try: ENSEMBL:ENST00000274520 under /statements

Query status shows 2 results You get the 2 results if pageSize >= 3, but only 1 result if pageSize = 2

isuen commented 6 years ago

Seems to be an issue with bio.knowledge.database.repository.StatementRepository.getQueryResults() CYPHER query - only returns 1 result even when pageSize is 2

isuen commented 6 years ago

Also a problem on the /concepts/data/{queryId} endpoint:

CYPHER query seems to be matching on the search term (and not the queryTracker), so any returned data that doesn't contain the search term is filtered out

e.g. search GDM with NDEX and TKG-Monarch linked up, only 1 result returned (even though status finds 3, and neo4j graph has 3 concept cliques)

isuen commented 6 years ago

seems to be a case where some results returned don't actually have the search term in the name or description (could be a beacon-specific bug)