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A repo for tracking gaps in Translator data and finding ways to fill them.
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drug likely causing the symptoms of disease instead of treating #489

Open TranslatorIssueCreator opened 12 months ago

TranslatorIssueCreator commented 12 months ago

Type: Bug Report

URL: https://ui.ci.transltr.io/results?l=Premature%20Menopause&i=MONDO:0001119&t=0&q=6e634a64-cbc3-411f-91db-55a2862b7226

ARS PK: 6e634a64-cbc3-411f-91db-55a2862b7226

Steps to reproduce:

MVP1 on Premature menopause search for Lasofoxifene compound (in the top responses)

Screenshots:

sandrine-m commented 12 months ago

With the current Biolink model qualifiers, reasoning should be able to exclude that response (in the top ten): Lasofoxifene is an antagonist of ESR1 and therefore lead to decrease of estrogen pathways. Moreover Lasofoxifene adverse effects are similar to menoposal symptoms.

andrewsu commented 6 months ago

Current run:

Comes from Unsecret Agent, assigning to @webyrd to assess

image

webyrd commented 5 months ago

Thank you! We are investigating adding a filter to the answers returned by Unsecret Agent to ensure we don't return treatments that might actually cause the disease to be treated. Currently the filter step slows down our queries significantly. We are investigating more efficient approaches that should remove these sorts of answers without slowing down our queries significantly.