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NCATSTranslator / Feedback

A repo for tracking gaps in Translator data and finding ways to fill them.
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Multiple entries for same result (Baclofen may treat Cerebral Palsy) #623

Open mbrush opened 11 months ago

mbrush commented 11 months ago

This must be a known issue, but I couldn't find an open ticket about it, so reporting it here.

I have seen several cases where the same Results shows up multiple times. e.g. 'Baclofen' for "What may treat Cerebral Palsy": https://ui.test.transltr.io/main/results?l=Cerebral%20Palsy&i=MONDO:0006497&t=0&q=52bea588-5893-48b2-8561-16309ab0a1ed

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Each entry is associated with a distinct but overlapping set of sources.

Note also that support paths for the second Baclofen include two of the same path - the direct edge /answer edge "Baclofen treats Cerebral Palsy" - each associated with different provenance.

I also noted that DrugCentral is reported as a primary source for this Result (and for the Arbaclofen Result), but I could find no info in Drug Central connecting either of these drugs to Cerebral Palsy. (Arbaclofen didn't even have a record in DrugCentral at all). Made a separate ticket #622.

gglusman commented 11 months ago

Related to #576 #485 #438

gaurav commented 8 months ago

Reported to Babel at https://github.com/TranslatorSRI/Babel/issues/232

gaurav commented 2 months ago

This is another example of https://github.com/TranslatorSRI/Babel/issues/310, which we hope to come up with a general solution to for Guppy.

gaurav commented 1 month ago

All protein/chemical conflation issues are being pushed to Hammerhead.