Should Semmed Treats One-Hops be Lookup Paths in the UI? Direct Paths in the ARA?

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Should Semmed Treats One-Hops be Lookup Paths in the UI? Direct Paths in the ARA? #870

Closed sstemann closed 4 weeks ago

sstemann commented 2 months ago

Test UI (Eel) > MVP1 > Common Cold

https://ui.test.transltr.io/main/results?l=Common%20Cold&i=MONDO:0005709&t=0&r=0&q=44402a77-4114-4ac4-8438-dbd39a8b97aa

https://arax.ncats.io/?r=44402a77-4114-4ac4-8438-dbd39a8b97aa

PK: 44402a77-4114-4ac4-8438-dbd39a8b97aa

Look at any of these results: Zinc Lozenge Nasal Decongestants Decongestants Pseudoephedrine

In the ARAX GUI you can see these direct paths with only Semmed EPC from:

ARAGORN

ARAX

Unsecret

BTE has 0 results for this query

These examples are not in Improve.

sstemann commented 2 months ago

related to #854

cbizon commented 2 months ago

I think that this is a duplicate of #871 and can probably be closed as such

cbizon commented 2 months ago

( I dont see a duplicate tag )

saramsey commented 2 months ago

closing since this is a dup of #871

sstemann commented 2 months ago

this one is about if its a Lookup or an inferred path. #871 is about which of the treats predicates to use.

colleenXu commented 2 months ago

Do I need to be assigned to this issue? It looks like some comments may have been deleted, and BTE isn't actually involved in this issue (no response).

cbizon commented 2 months ago

Sorry @colleenXu my fault

sstemann commented 1 month ago

seems like the answer here was yes and it seems pretty consistent

https://ui.test.transltr.io/demo/results?l=Common%20Cold&i=MONDO:0005709&t=0&r=0&q=c5aa86ad-8d24-4cf2-a01a-36aaa00e2224

sstemann commented 4 weeks ago

looks resolved on Prod