Open sstemann opened 2 weeks ago
After reviewing this with Gus the data that's coming back from BTE appears to be correct--they seem to be intending to return predicted edges as in the first result. So the first result is actually being displayed as BTE intended.
Both of the edges in each path in the second result are also marked as predictions in the data, but presently the UI does not support displaying more than 1 support graph per path, so they are appearing like direct edges. This will require a change to the UI backend to fix
this is an example of a direct path with 8000+ paths
my chrome wont expand it
ARAX graph:
In ARAX bottom edge
Left edge:
Right edge:
Inferred 'related' does not make sense to me for this?
I ran Pathfinder for Cystic Fibrosis and Joubert Syndrome
https://ui.ci.transltr.io/pathfinder/results?lone=Cystic%20Fibrosis<wo=Joubert%20Syndrome&ione=MONDO:0009061&itwo=MONDO:0018772&t=p&r=0&q=114f0fad-0b21-4248-94f0-fa0daa8dbd37
If you expand the first result - direct path, it looks like the support graphs (with genes) are displayed (i was expecting only direct paths)
If you expand the second result - with gene intermediary, all of the paths EPC are "BTE" only
It seems like the actual EPC is in the direct path.