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NCATSTranslator / minihackathons

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Improving ARS error on Workflow A.2 #196

Closed vgardner-renci closed 3 years ago

vgardner-renci commented 3 years ago

https://arax.ncats.io/?source=ARS&id=2a6a79e3-5662-4961-9375-79c599a2d954

image


{
  "description": "imProving Agent could not find query nodes of category ['biolink:SmallMolecule']; returning empty message...",
  "message": {},
  "status": "Query unprocessable",
  "validation_result": {
    "message": "",
    "size": "0.54 kB",
    "status": "PASS",
    "version": "1.1.1"
  },
  "araxui_provider": "ARS",
  "araxui_response": "d7ba9945-e177-44eb-ad75-c852738fd580"
}
brettasmi commented 3 years ago

I'm not able to recreate this error and I think there may be an error in this query: https://github.com/NCATSTranslator/minihackathons/blob/main/2021-12_demo/workflowA/A.2_RHOBTB2_twohop.json

I think it's missing the closing } for edge e01

When I add it and query the improving agent directly, it seems to work.

vgardner-renci commented 3 years ago

https://github.com/NCATSTranslator/minihackathons/blob/main/2021-12_demo/workflowA/A.2_RHOBTB2_twohop.json

jenndoug commented 3 years ago

@vgardner-renci Close?