Closed janpb closed 7 years ago
Try -parseseqids
On Oct 24, 2017 3:50 PM, "janpb" notifications@github.com wrote:
Creating a local database using makeblastdb without Fasta ID [0] results in unusable names for subsequent retrieval. Testing two options:
- Format the input sequences using >ref|Accsession|name
- Testing different blastdbcmd -outfmt options
References
0 https://www.ncbi.nlm.nih.gov/toolkit/doc/book/ch_demo/#ch_demo.T5 https://www.ncbi.nlm.nih.gov/toolkit/doc/book/ch_demo/#ch_demo.T5
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It is -parse_seqids
Fixed. Thanks.
Creating a local database using makeblastdb without Fasta ID [0] results in unusable names for subsequent retrieval. Testing two options:
>ref|Accsession|name
References
0 https://www.ncbi.nlm.nih.gov/toolkit/doc/book/ch_demo/#ch_demo.T5