I think this will work once the R script is added to the Docker image.
One issue I realised there is with R is that cwltool runs as root (or at least not as the user), so the R code has no access to locally installed packages. It should be fine if we install the packages as root within the Docker image, but it's something I'd rather avoid on my local system/
I think this will work once the R script is added to the Docker image.
One issue I realised there is with R is that cwltool runs as root (or at least not as the user), so the R code has no access to locally installed packages. It should be fine if we install the packages as root within the Docker image, but it's something I'd rather avoid on my local system/