NCBI-Hackathons Got_Plasmid issues - Githubissues

NCBI-Hackathons / Got_Plasmid

Retreive and visualize plasmid sequences from SRA and Next Generation Sequencing data.

MIT License

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issues

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Confirm that use of BLAST's `-max_target_seqs` is intentional

#15 armish opened 5 years ago
0
Rscripts/Rscript2_magicBlast_output.R

#14 sarah872 opened 6 years ago
0
For contigs that are of significant length and match no plasmids

#13 DCGenomics opened 6 years ago
0
Blast all plasmids x all plasmids

#12 DCGenomics opened 6 years ago
0
For phages, integrate Endovir into your workflow

#11 DCGenomics opened 6 years ago
0
Install perl module locally

#10 Rickcopin opened 6 years ago
0
Local R installation

#9 Rickcopin opened 6 years ago
0
Getting assembly accessions for a staph ID

#8 DCGenomics opened 6 years ago
0
Cluster plasmids by readset hits

#7 DCGenomics opened 6 years ago
0
Resut tables should be spelled 'result'

#6 DCGenomics opened 6 years ago
0
For "Steps"

#5 DCGenomics opened 6 years ago
1
Code

#4 Rickcopin opened 6 years ago
0
Got plasmids?

#3 DCGenomics opened 6 years ago
5
Assembler Options

#2 DCGenomics opened 6 years ago
0
Project rational

#1 Rickcopin closed 6 years ago
1