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NCEAS / metacat

Data repository software that helps researchers preserve, share, and discover data
https://knb.ecoinformatics.org/software/metacat
GNU General Public License v2.0
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Update DOIs from KNB to redirect to view service #1083

Closed mbjones closed 5 years ago

mbjones commented 6 years ago

Author Name: Matt Jones (Matt Jones) Original Redmine Issue: 6793, https://projects.ecoinformatics.org/ecoinfo/issues/6793 Original Date: 2015-07-02 Original Assignee: ben leinfelder

In #6530 and #6440, we added features to update DOI registrations, but we still have many originally assigned DOIs that redirect to the raw EML document rather than our landing page for a data set. We need to fix all of the /AA/ DOI registrations in the KNB and ensure they point to the right View service page. For DOIs for metadata, that would be the associated /view url for that DOI. For data files and resource maps, its to the view for the associated metadata. E.g.,

Also, when a user updates metadata for a package (but doesn't change the data), the DOI redirect for the data will need to be updated to point to the new metadata. Let's verify that this is happening automatically in Metacat.

mbjones commented 6 years ago

Original Redmine Comment Author Name: Lauren Walker (Lauren Walker) Original Date: 2015-07-02T19:46:17Z

MetacatUI 1.7.0 will redirect to the associated metadata view for any given data pid. So managing the EZID registrations for those DOI's, at least, is unnecessary.

mbjones commented 6 years ago

Original Redmine Comment Author Name: ben leinfelder (ben leinfelder) Original Date: 2016-01-25T15:33:08Z

Megan Force at Thompson Reuters is reporting our old DOIs still point to XML representations of the metadata rather than the #view landing page.

mbjones commented 6 years ago

Original Redmine Comment Author Name: ben leinfelder (ben leinfelder) Original Date: 2016-01-25T15:48:03Z

I was able to use our Metacat admin tool to update an example DOI - doi:10.5063/AA/dpennington.338.2 now points to the #view page. Running the update routine for all EML format ids now.

mbjones commented 6 years ago

Original Redmine Comment Author Name: ben leinfelder (ben leinfelder) Original Date: 2016-01-25T18:16:24Z

Ran the DOI updater for EML 2.0.0, 2.0.1, 2.1.0, and 2.1.1 formats. All EML DOIs should be resolving to the #view endpoint now.

taojing2002 commented 5 years ago

I tested the tool on the Metacat admin page and it didn't work. I looked at code and found the tool getsdocids rather than pids from xml_documents and xml_revisions tables. Then it examines the docid to see if it starts with doi. If the docid starts with the doi, the tool will update the datacite information for this docid. However, docids generally don't start with doi, so no docids were processed. We should look at the pids on the systemmetadata table.