TEGS4_Run RENEE and QC

[Krithika-Bhuvan]

Project title - Analyzing biological response of RMS cells to CDK8 inhibitor

• Thanksgiving week - Ran RENEE . It generated gene counts but did not run after MultiQC step. Errored out
• Week of Nov 27
  • Do preliminary analysis of RNA-seq on iDEP to help come up with an analysis plan.
  • Ran MultiQC outside of RENEE - completed
• Next steps
  • Share the QC from RENEE and the analysis plan with Unkhyun to confirm his research questions.
  • Once Unkhyun approves, complete RNA-seq analysis on iDEP