Reference access permission and GRCh38

NCI-CGR / GEMSCAN

Joint variant calling with GATK4 HaplotypeCaller, Google DeepVariant 1.0.0 and Strelka2, coordinated via Snakemake.

https://nci-cgr.github.io/GEMSCAN/

MIT License

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Closed Binz-Z closed 3 years ago

Binz-Z commented 3 years ago

Hi Wendy,

I got a permission error when I try to access: /scratch/GEMSCAN_tutorial/hg19/. Also, could you put a GRCh38 reference file there too?

Thanks!