NCI-CGR / GwasQcPipeline

The CGR GWAS QC processing workflow.
https://nci-cgr.github.io/GwasQcPipeline/
MIT License
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Add Slurm option for account to be charged for resources used #289

Open jaamarks opened 5 months ago

jaamarks commented 5 months ago

Our collaborator in Cambridge just had a successful run! We have a question about the --submission-cmd param, on the Cambridge HPC the jobs will go faster specifying "-A " which is the pay option, can this be added to --submission-cmd or some other way?

Slurm offers the ability to include a number of options for a job submission. One of those is --account which is the account to be charged for resources used. It would be nice to have the feature included in the pipeline. https://slurm.schedmd.com/pdfs/summary.pdf