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NCI-CGR / IlluminaSequencingAnalysis

All Illumina Sequencing Related project from Xin will be recorded in this repo
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CustomizedQC: submitted jobs were missing & run 2 batches a time #18

Open lxwgcool opened 3 years ago

lxwgcool commented 3 years ago

Two Issues

Issue 1

If we move . bashrc inside script, the sbatch CMD will be printout but never be processed (no idea why). Solution: Load bashrc in contab

Issue 2

Since the data is pretty big, run one batch a time is time waiting. We can run 2 flowcells a time, and it won't cause any storage issues.