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NCI-CGR / IlluminaSequencingAnalysis

All Illumina Sequencing Related project from Xin will be recorded in this repo
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Ad-hoc: H Pylori Project Call variant by using assembled sample #56

Open lxwgcool opened 1 year ago

lxwgcool commented 1 year ago

Resource and output dir:

/DCEG/Projects/Exome/SequencingData/DAATeam/Xin/ad_hoc/H_Pylori

Testing Data

/DCEG/Projects/Exome/SequencingData/DAATeam/Xin/ad_hoc/H_Pylori/Data

Testing variant calling Result

/DCEG/Projects/Exome/SequencingData/DAATeam/Xin/ad_hoc/H_Pylori/Test/CallVariant

Aligned BAM

/DCEG/Projects/Exome/SequencingData/DAATeam/Xin/ad_hoc/H_Pylori/Test/Output
lxwgcool commented 1 year ago

Add additional clause to get the accurate position for each cigar signal.