when the sample size of one of the comparisons is below the threshold it does not produce the tracking files to inform the next steps, and then when running meta the pipeline breaks
make[1]: *** No rule to make target '.../?.SAIGE.categorical-combined.tsv.success', needed by '/.../?.SAIGE.final-ids.tsv.success'. Stop.
when the sample size of one of the comparisons is below the threshold it does not produce the tracking files to inform the next steps, and then when running meta the pipeline breaks
make[1]: *** No rule to make target '.../?.SAIGE.categorical-combined.tsv.success', needed by '/.../?.SAIGE.final-ids.tsv.success'. Stop.